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Health Data Processing

Health Data Processing PDF Author: Marius Fieschi
Publisher: Elsevier
ISBN: 0081027583
Category : Science
Languages : en
Pages : 340

Book Description
Health Data Processing: Systemic Approaches focuses on the design of health information systems and touches on the main themes of medical informatics and public health. The book is written for health professionals in practice or training, and is especially useful for decision-makers or future decision-makers in the field of health information systems. Users will find sections on the question of reusing data for other purposes, protection of individual liberties that this data and technologies make more acute, and the irruption of large masses of genetic data and its related problems. This book develops the methodological and conceptual aspects related to these issues. Proposes a methodology for the development of health information systems for the better use of digital technologies Illustrates a systemic, transversal, conceptual vision that supports the complex reality of the healthcare world, where the interoperability of agents (professionals and software) is central Discusses the reuse of resources of data for knowledge improvement, health security and public health

Health Data Processing

Health Data Processing PDF Author: Marius Fieschi
Publisher: Elsevier
ISBN: 0081027583
Category : Science
Languages : en
Pages : 340

Book Description
Health Data Processing: Systemic Approaches focuses on the design of health information systems and touches on the main themes of medical informatics and public health. The book is written for health professionals in practice or training, and is especially useful for decision-makers or future decision-makers in the field of health information systems. Users will find sections on the question of reusing data for other purposes, protection of individual liberties that this data and technologies make more acute, and the irruption of large masses of genetic data and its related problems. This book develops the methodological and conceptual aspects related to these issues. Proposes a methodology for the development of health information systems for the better use of digital technologies Illustrates a systemic, transversal, conceptual vision that supports the complex reality of the healthcare world, where the interoperability of agents (professionals and software) is central Discusses the reuse of resources of data for knowledge improvement, health security and public health

Data and Text Processing for Health and Life Sciences

Data and Text Processing for Health and Life Sciences PDF Author: Francisco M. Couto
Publisher: Springer
ISBN: 3030138453
Category : Medical
Languages : en
Pages : 98

Book Description
This open access book is a step-by-step introduction on how shell scripting can help solve many of the data processing tasks that Health and Life specialists face everyday with minimal software dependencies. The examples presented in the book show how simple command line tools can be used and combined to retrieve data and text from web resources, to filter and mine literature, and to explore the semantics encoded in biomedical ontologies. To store data this book relies on open standard text file formats, such as TSV, CSV, XML, and OWL, that can be open by any text editor or spreadsheet application. The first two chapters, Introduction and Resources, provide a brief introduction to the shell scripting and describe popular data resources in Health and Life Sciences. The third chapter, Data Retrieval, starts by introducing a common data processing task that involves multiple data resources. Then, this chapter explains how to automate each step of that task by introducing the required commands line tools one by one. The fourth chapter, Text Processing, shows how to filter and analyze text by using simple string matching techniques and regular expressions. The last chapter, Semantic Processing, shows how XPath queries and shell scripting is able to process complex data, such as the graphs used to specify ontologies. Besides being almost immutable for more than four decades and being available in most of our personal computers, shell scripting is relatively easy to learn by Health and Life specialists as a sequence of independent commands. Comprehending them is like conducting a new laboratory protocol by testing and understanding its procedural steps and variables, and combining their intermediate results. Thus, this book is particularly relevant to Health and Life specialists or students that want to easily learn how to process data and text, and which in return may facilitate and inspire them to acquire deeper bioinformatics skills in the future.

Registries for Evaluating Patient Outcomes

Registries for Evaluating Patient Outcomes PDF Author: Agency for Healthcare Research and Quality/AHRQ
Publisher: Government Printing Office
ISBN: 1587634333
Category : Medical
Languages : en
Pages : 396

Book Description
This User’s Guide is intended to support the design, implementation, analysis, interpretation, and quality evaluation of registries created to increase understanding of patient outcomes. For the purposes of this guide, a patient registry is an organized system that uses observational study methods to collect uniform data (clinical and other) to evaluate specified outcomes for a population defined by a particular disease, condition, or exposure, and that serves one or more predetermined scientific, clinical, or policy purposes. A registry database is a file (or files) derived from the registry. Although registries can serve many purposes, this guide focuses on registries created for one or more of the following purposes: to describe the natural history of disease, to determine clinical effectiveness or cost-effectiveness of health care products and services, to measure or monitor safety and harm, and/or to measure quality of care. Registries are classified according to how their populations are defined. For example, product registries include patients who have been exposed to biopharmaceutical products or medical devices. Health services registries consist of patients who have had a common procedure, clinical encounter, or hospitalization. Disease or condition registries are defined by patients having the same diagnosis, such as cystic fibrosis or heart failure. The User’s Guide was created by researchers affiliated with AHRQ’s Effective Health Care Program, particularly those who participated in AHRQ’s DEcIDE (Developing Evidence to Inform Decisions About Effectiveness) program. Chapters were subject to multiple internal and external independent reviews.

Secondary Analysis of Electronic Health Records

Secondary Analysis of Electronic Health Records PDF Author: MIT Critical Data
Publisher: Springer
ISBN: 3319437429
Category : Medical
Languages : en
Pages : 427

Book Description
This book trains the next generation of scientists representing different disciplines to leverage the data generated during routine patient care. It formulates a more complete lexicon of evidence-based recommendations and support shared, ethical decision making by doctors with their patients. Diagnostic and therapeutic technologies continue to evolve rapidly, and both individual practitioners and clinical teams face increasingly complex ethical decisions. Unfortunately, the current state of medical knowledge does not provide the guidance to make the majority of clinical decisions on the basis of evidence. The present research infrastructure is inefficient and frequently produces unreliable results that cannot be replicated. Even randomized controlled trials (RCTs), the traditional gold standards of the research reliability hierarchy, are not without limitations. They can be costly, labor intensive, and slow, and can return results that are seldom generalizable to every patient population. Furthermore, many pertinent but unresolved clinical and medical systems issues do not seem to have attracted the interest of the research enterprise, which has come to focus instead on cellular and molecular investigations and single-agent (e.g., a drug or device) effects. For clinicians, the end result is a bit of a “data desert” when it comes to making decisions. The new research infrastructure proposed in this book will help the medical profession to make ethically sound and well informed decisions for their patients.

High-Performance Modelling and Simulation for Big Data Applications

High-Performance Modelling and Simulation for Big Data Applications PDF Author: Joanna Kołodziej
Publisher: Springer
ISBN: 3030162729
Category : Computers
Languages : en
Pages : 364

Book Description
This open access book was prepared as a Final Publication of the COST Action IC1406 “High-Performance Modelling and Simulation for Big Data Applications (cHiPSet)“ project. Long considered important pillars of the scientific method, Modelling and Simulation have evolved from traditional discrete numerical methods to complex data-intensive continuous analytical optimisations. Resolution, scale, and accuracy have become essential to predict and analyse natural and complex systems in science and engineering. When their level of abstraction raises to have a better discernment of the domain at hand, their representation gets increasingly demanding for computational and data resources. On the other hand, High Performance Computing typically entails the effective use of parallel and distributed processing units coupled with efficient storage, communication and visualisation systems to underpin complex data-intensive applications in distinct scientific and technical domains. It is then arguably required to have a seamless interaction of High Performance Computing with Modelling and Simulation in order to store, compute, analyse, and visualise large data sets in science and engineering. Funded by the European Commission, cHiPSet has provided a dynamic trans-European forum for their members and distinguished guests to openly discuss novel perspectives and topics of interests for these two communities. This cHiPSet compendium presents a set of selected case studies related to healthcare, biological data, computational advertising, multimedia, finance, bioinformatics, and telecommunications.

Fundamentals of Clinical Data Science

Fundamentals of Clinical Data Science PDF Author: Pieter Kubben
Publisher: Springer
ISBN: 3319997130
Category : Medical
Languages : en
Pages : 219

Book Description
This open access book comprehensively covers the fundamentals of clinical data science, focusing on data collection, modelling and clinical applications. Topics covered in the first section on data collection include: data sources, data at scale (big data), data stewardship (FAIR data) and related privacy concerns. Aspects of predictive modelling using techniques such as classification, regression or clustering, and prediction model validation will be covered in the second section. The third section covers aspects of (mobile) clinical decision support systems, operational excellence and value-based healthcare. Fundamentals of Clinical Data Science is an essential resource for healthcare professionals and IT consultants intending to develop and refine their skills in personalized medicine, using solutions based on large datasets from electronic health records or telemonitoring programmes. The book’s promise is “no math, no code”and will explain the topics in a style that is optimized for a healthcare audience.

Biostatistics and Computer-based Analysis of Health Data Using SAS

Biostatistics and Computer-based Analysis of Health Data Using SAS PDF Author: Christophe Lalanne
Publisher: Elsevier
ISBN: 0081011717
Category : Computers
Languages : en
Pages : 174

Book Description
This volume of the Biostatistics and Health Sciences Set focuses on statistics applied to clinical research. The use of SAS for data management and statistical modeling is illustrated using various examples. Many aspects of data processing and statistical analysis of cross-sectional and experimental medical data are covered, including regression models commonly found in medical statistics. This practical book is primarily intended for health researchers with a basic knowledge of statistical methodology. Assuming basic concepts, the authors focus on the practice of biostatistical methods essential to clinical research, epidemiology and analysis of biomedical data (including comparison of two groups, analysis of categorical data, ANOVA, linear and logistic regression, and survival analysis). The use of examples from clinical trials and epidemiological studies provide the basis for a series of practical exercises, which provide instruction and familiarize the reader with essential SAS commands. Presents the use of SAS software in the statistical approach for the management of data modeling Includes elements of the language and descriptive statistics Supplies measures of association, comparison of means, and proportions for two or more samples Explores linear and logistic regression Provides survival data analysis

OECD Health Policy Studies Health Data Governance Privacy, Monitoring and Research

OECD Health Policy Studies Health Data Governance Privacy, Monitoring and Research PDF Author: OECD
Publisher: OECD Publishing
ISBN: 9264244565
Category :
Languages : en
Pages : 200

Book Description
This report identifies eight key data governance mechanisms to maximise benefits to patients and to societies from the collection, linkage and analysis of health data, and to minimise risks to both patient privacy and the security of health data.

Statistics & Data Analytics for Health Data Management

Statistics & Data Analytics for Health Data Management PDF Author: Nadinia A. Davis
Publisher: Elsevier Health Sciences
ISBN: 0323292216
Category : Medical
Languages : en
Pages : 266

Book Description
Introducing Statistics & Data Analytics for Health Data Management by Nadinia Davis and Betsy Shiland, an engaging new text that emphasizes the easy-to-learn, practical use of statistics and manipulation of data in the health care setting. With its unique hands-on approach and friendly writing style, this vivid text uses real-world examples to show you how to identify the problem, find the right data, generate the statistics, and present the information to other users. Brief Case scenarios ask you to apply information to situations Health Information Management professionals encounter every day, and review questions are tied to learning objectives and Bloom’s taxonomy to reinforce core content. From planning budgets to explaining accounting methodologies, Statistics & Data Analytics addresses the key HIM Associate Degree-Entry Level competencies required by CAHIIM and covered in the RHIT exam. Meets key HIM Associate Degree-Entry Level competencies, as required by CAHIIM and covered on the RHIT registry exam, so you get the most accurate and timely content, plus in-depth knowledge of statistics as used on the job. Friendly, engaging writing style offers a student-centered approach to the often daunting subject of statistics. Four-color design with ample visuals makes this the only textbook of its kind to approach bland statistical concepts and unfamiliar health care settings with vivid illustrations and photos. Math review chapter brings you up-to-speed on the math skills you need to complete the text. Brief Case scenarios strengthen the text’s hands-on, practical approach by taking the information presented and asking you to apply it to situations HIM professionals encounter every day. Takeaway boxes highlight key points and important concepts. Math Review boxes remind you of basic arithmetic, often while providing additional practice. Stat Tip boxes explain trickier calculations, often with Excel formulas, and warn of pitfalls in tabulation. Review questions are tied to learning objectives and Bloom’s taxonomy to reinforce core content and let you check your understanding of all aspects of a topic. Integrated exercises give you time to pause, reflect, and retain what you have learned. Answers to integrated exercises, Brief Case scenarios, and review questions in the back of the book offer an opportunity for self-study. Appendix of commonly used formulas provides easy reference to every formula used in the textbook. A comprehensive glossary gives you one central location to look up the meaning of new terminology. Instructor resources include TEACH lesson plans, PowerPoint slides, classroom handouts, and a 500-question Test Bank in ExamView that help prepare instructors for classroom lectures.

Anonymizing Health Data

Anonymizing Health Data PDF Author: Khaled El Emam
Publisher: "O'Reilly Media, Inc."
ISBN: 1449363032
Category : Computers
Languages : en
Pages : 228

Book Description
Updated as of August 2014, this practical book will demonstrate proven methods for anonymizing health data to help your organization share meaningful datasets, without exposing patient identity. Leading experts Khaled El Emam and Luk Arbuckle walk you through a risk-based methodology, using case studies from their efforts to de-identify hundreds of datasets. Clinical data is valuable for research and other types of analytics, but making it anonymous without compromising data quality is tricky. This book demonstrates techniques for handling different data types, based on the authors’ experiences with a maternal-child registry, inpatient discharge abstracts, health insurance claims, electronic medical record databases, and the World Trade Center disaster registry, among others. Understand different methods for working with cross-sectional and longitudinal datasets Assess the risk of adversaries who attempt to re-identify patients in anonymized datasets Reduce the size and complexity of massive datasets without losing key information or jeopardizing privacy Use methods to anonymize unstructured free-form text data Minimize the risks inherent in geospatial data, without omitting critical location-based health information Look at ways to anonymize coding information in health data Learn the challenge of anonymously linking related datasets