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Applications of Membrane Computing in Systems and Synthetic Biology

Applications of Membrane Computing in Systems and Synthetic Biology PDF Author: Pierluigi Frisco
Publisher: Springer Science & Business Media
ISBN: 3319031910
Category : Technology & Engineering
Languages : en
Pages : 266

Book Description
Membrane Computing was introduced as a computational paradigm in Natural Computing. The models introduced, called Membrane (or P) Systems, provide a coherent platform to describe and study living cells as computational systems. Membrane Systems have been investigated for their computational aspects and employed to model problems in other fields, like: Computer Science, Linguistics, Biology, Economy, Computer Graphics, Robotics, etc. Their inherent parallelism, heterogeneity and intrinsic versatility allow them to model a broad range of processes and phenomena, being also an efficient means to solve and analyze problems in a novel way. Membrane Computing has been used to model biological systems, becoming with time a thorough modeling paradigm comparable, in its modeling and predicting capabilities, to more established models in this area. This book is the result of the need to collect, in an organic way, different facets of this paradigm. The chapters of this book, together with the web pages accompanying them, present different applications of Membrane Systems to Biology. Deterministic, non-deterministic and stochastic systems paired with different algorithms and methodologies show the full potential of this framework. The book is addressed to researchers interested in applications of discrete biological models and the interplay between Membrane Systems and other approaches to analyze complex systems.

Applications of Membrane Computing in Systems and Synthetic Biology

Applications of Membrane Computing in Systems and Synthetic Biology PDF Author: Pierluigi Frisco
Publisher: Springer Science & Business Media
ISBN: 3319031910
Category : Technology & Engineering
Languages : en
Pages : 266

Book Description
Membrane Computing was introduced as a computational paradigm in Natural Computing. The models introduced, called Membrane (or P) Systems, provide a coherent platform to describe and study living cells as computational systems. Membrane Systems have been investigated for their computational aspects and employed to model problems in other fields, like: Computer Science, Linguistics, Biology, Economy, Computer Graphics, Robotics, etc. Their inherent parallelism, heterogeneity and intrinsic versatility allow them to model a broad range of processes and phenomena, being also an efficient means to solve and analyze problems in a novel way. Membrane Computing has been used to model biological systems, becoming with time a thorough modeling paradigm comparable, in its modeling and predicting capabilities, to more established models in this area. This book is the result of the need to collect, in an organic way, different facets of this paradigm. The chapters of this book, together with the web pages accompanying them, present different applications of Membrane Systems to Biology. Deterministic, non-deterministic and stochastic systems paired with different algorithms and methodologies show the full potential of this framework. The book is addressed to researchers interested in applications of discrete biological models and the interplay between Membrane Systems and other approaches to analyze complex systems.

Membrane Computing Models: Implementations

Membrane Computing Models: Implementations PDF Author: Gexiang Zhang
Publisher: Springer Nature
ISBN: 9811615667
Category : Computers
Languages : en
Pages : 292

Book Description
The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models.

Applications of Membrane Computing

Applications of Membrane Computing PDF Author: Gabriel Ciobanu
Publisher: Springer Science & Business Media
ISBN: 3540299378
Category : Computers
Languages : en
Pages : 441

Book Description
Membrane computing is a branch of natural computing which investigates computing models abstracted from the structure and functioning of living cells and from their interactions in tissues or higher-order biological structures. The models considered, called membrane systems (P systems), are parallel, distributed computing models, processing multisets of symbols in cell-like compartmental architectures. In many applications membrane systems have considerable advantages – among these are their inherently discrete nature, parallelism, transparency, scalability and nondeterminism. In dedicated chapters, leading experts explain most of the applications of membrane computing reported so far, in biology, computer science, computer graphics and linguistics. The book also contains detailed reviews of the software tools used to simulate P systems.

Real-life Applications with Membrane Computing

Real-life Applications with Membrane Computing PDF Author: Gexiang Zhang
Publisher: Springer
ISBN: 3319559893
Category : Technology & Engineering
Languages : en
Pages : 355

Book Description
This book thoroughly investigates the underlying theoretical basis of membrane computing models, and reveals their latest applications. In addition, to date there have been no illustrative case studies or complex real-life applications that capitalize on the full potential of the sophisticated membrane systems computational apparatus; gaps that this book remedies. By studying various complex applications – including engineering optimization, power systems fault diagnosis, mobile robot controller design, and complex biological systems involving data modeling and process interactions – the book also extends the capabilities of membrane systems models with features such as formal verification techniques, evolutionary approaches, and fuzzy reasoning methods. As such, the book offers a comprehensive and up-to-date guide for all researchers, PhDs and undergraduate students in the fields of computer science, engineering and the bio-sciences who are interested in the applications of natural computing models.

Membrane Computing

Membrane Computing PDF Author: Marian Gheorghe
Publisher: Springer
ISBN: 3319143700
Category : Computers
Languages : en
Pages : 397

Book Description
This book constitutes the thoroughly refereed post-conference proceedings of the 15th International Conference on Membrane Computing, CMC 2014, held in Prague, Czech Republic, in August 2014. The 19 revised selected papers presented together with 5 invited lectures were carefully reviewed and selected from 24 papers presented at the conference. In addition, two papers selected from the 22 papers presented at the regional version of CMC, the Asian Conference on Membrane Computing , ACMC 2014, held in Coimbatore, India, are included. The papers cover a wide range of topics in the area of membrane computing, which is an area of computer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures.

Membrane Computing

Membrane Computing PDF Author: Alberto Leporati
Publisher: Springer
ISBN: 3319540726
Category : Computers
Languages : en
Pages : 363

Book Description
This book contains revised selected papers from the 17th International Conference on Membrane Computing, CMC 2017, held in Milan, Italy, in July 2016. The 19 full papers presented in this volume were carefully reviewed and selected from 28 submissions. They deal with membrane computing (P systems theory), an area of copmputer science aiming to abstract computing ideas and models from the structure and the functioning of living cells, as well as from the way the cells are organized in tissues or higher order structures. The volume also contains 3 invited talks in full-paper length.

Membrane Computing Models: Implementations

Membrane Computing Models: Implementations PDF Author: Gexiang Zhang
Publisher:
ISBN: 9789811615672
Category :
Languages : en
Pages : 0

Book Description
The theoretical basis of membrane computing was established in the early 2000s with fundamental research into the computational power, complexity aspects and relationships with other (un)conventional computing paradigms. Although this core theoretical research has continued to grow rapidly and vigorously, another area of investigation has since been added, focusing on the applications of this model in many areas, most prominently in systems and synthetic biology, engineering optimization, power system fault diagnosis and mobile robot controller design. The further development of these applications and their broad adoption by other researchers, as well as the expansion of the membrane computing modelling paradigm to other applications, call for a set of robust, efficient, reliable and easy-to-use tools supporting the most significant membrane computing models. This work provides comprehensive descriptions of such tools, making it a valuable resource for anyone interested in membrane computing models. .

Advances in Unconventional Computing

Advances in Unconventional Computing PDF Author: Andrew Adamatzky
Publisher: Springer
ISBN: 3319339249
Category : Technology & Engineering
Languages : en
Pages : 874

Book Description
The unconventional computing is a niche for interdisciplinary science, cross-bred of computer science, physics, mathematics, chemistry, electronic engineering, biology, material science and nanotechnology. The aims of this book are to uncover and exploit principles and mechanisms of information processing in and functional properties of physical, chemical and living systems to develop efficient algorithms, design optimal architectures and manufacture working prototypes of future and emergent computing devices. This first volume presents theoretical foundations of the future and emergent computing paradigms and architectures. The topics covered are computability, (non-)universality and complexity of computation; physics of computation, analog and quantum computing; reversible and asynchronous devices; cellular automata and other mathematical machines; P-systems and cellular computing; infinity and spatial computation; chemical and reservoir computing. The book is the encyclopedia, the first ever complete authoritative account, of the theoretical and experimental findings in the unconventional computing written by the world leaders in the field. All chapters are self-contains, no specialist background is required to appreciate ideas, findings, constructs and designs presented. This treatise in unconventional computing appeals to readers from all walks of life, from high-school pupils to university professors, from mathematicians, computers scientists and engineers to chemists and biologists.

Membrane Computing

Membrane Computing PDF Author: Grzegorz Rozenberg
Publisher: Springer
ISBN: 3319284754
Category : Computers
Languages : en
Pages : 387

Book Description
This book constitutes revised selected papers from the International Conference on Membrane Computing, CMC 2015, held in Valencia, Spain, in August 2015. The 22 full papers presented in this volume were carefully reviewed and selected from 34 submissions. The volume also contains 3 invited talks in full-paper length.

Bio-inspired Computing – Theories and Applications

Bio-inspired Computing – Theories and Applications PDF Author: Maoguo Gong
Publisher: Springer
ISBN: 981103611X
Category : Computers
Languages : en
Pages : 528

Book Description
The two-volume set, CCIS 681 and CCIS 682, constitutes the proceedings of the 11th International Conference on Bio-Inspired Computing: Theories and Applications, BIC-TA 2016, held in Xi'an, China, in October 2016.The 115 revised full papers presented were carefully reviewed and selected from 343 submissions. The papers of Part I are organized in topical sections on DNA Computing; Membrane Computing; Neural Computing; Machine Learning. The papers of Part II are organized in topical sections on Evolutionary Computing; Multi-objective Optimization; Pattern Recognition; Others.