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eScience on Distributed Computing Infrastructure

eScience on Distributed Computing Infrastructure PDF Author: Marian Bubak
Publisher: Springer
ISBN: 3319108948
Category : Computers
Languages : en
Pages : 538

Book Description
To help researchers from different areas of science understand and unlock the potential of the Polish Grid Infrastructure and to define their requirements and expectations, the following 13 pilot communities have been organized and involved in the PLGrid Plus project: Acoustics, AstroGrid-PL, Bioinformatics, Ecology, Energy Sector, Health Sciences, HEPGrid, Life Science, Materials, Metallurgy, Nanotechnologies, Quantum Chemistry and Molecular Physics, and SynchroGrid. The book describes the experience and scientific results achieved by the project partners. Chapters 1 to 8 provide a general overview of research and development activities in the framework of the project with emphasis on services for different scientific areas and an update on the status of the PL-Grid infrastructure, describing new developments in security and middleware. Chapters 9 to 13 discuss new environments and services which may be applied by all scientific communities. Chapters 14 to 36 present how the PLGrid Plus environments, tools and services are used in advanced domain specific computer simulations; these chapters present computational models, new algorithms, and ways in which they are implemented. The book also provides a glossary of terms and concepts. This book may serve as a resource for researchers, developers and system administrators working on efficient exploitation of available e-infrastructures, promoting collaboration and exchange of ideas in the process of constructing a common European e-infrastructure.

eScience on Distributed Computing Infrastructure

eScience on Distributed Computing Infrastructure PDF Author: Marian Bubak
Publisher: Springer
ISBN: 3319108948
Category : Computers
Languages : en
Pages : 538

Book Description
To help researchers from different areas of science understand and unlock the potential of the Polish Grid Infrastructure and to define their requirements and expectations, the following 13 pilot communities have been organized and involved in the PLGrid Plus project: Acoustics, AstroGrid-PL, Bioinformatics, Ecology, Energy Sector, Health Sciences, HEPGrid, Life Science, Materials, Metallurgy, Nanotechnologies, Quantum Chemistry and Molecular Physics, and SynchroGrid. The book describes the experience and scientific results achieved by the project partners. Chapters 1 to 8 provide a general overview of research and development activities in the framework of the project with emphasis on services for different scientific areas and an update on the status of the PL-Grid infrastructure, describing new developments in security and middleware. Chapters 9 to 13 discuss new environments and services which may be applied by all scientific communities. Chapters 14 to 36 present how the PLGrid Plus environments, tools and services are used in advanced domain specific computer simulations; these chapters present computational models, new algorithms, and ways in which they are implemented. The book also provides a glossary of terms and concepts. This book may serve as a resource for researchers, developers and system administrators working on efficient exploitation of available e-infrastructures, promoting collaboration and exchange of ideas in the process of constructing a common European e-infrastructure.

Data Driven e-Science

Data Driven e-Science PDF Author: Simon C. Lin
Publisher: Springer Science & Business Media
ISBN: 1441980148
Category : Computers
Languages : en
Pages : 517

Book Description
ISGC 2010, The International Symposium on Grid Computing was held at Academia Sinica, Taipei, Taiwan, March, 2010. The 2010 symposium brought together prestigious scientists and engineers worldwide to exchange ideas, present challenges/solutions and to discuss new topics in the field of Grid Computing. Data Driven e-Science: Use Cases and Successful Applications of Distributed Computing Infrastructures (ISGC 2010), an edited volume, introduces the latest achievements in grid technology for Biomedicine Life Sciences, Middleware, Security, Networking, Digital Library, Cloud Computing and more. This book provides Grid developers and end users with invaluable information for developing grid technology and applications. The last section of this book presents future development in the field of Grid Computing. This book is designed for a professional audience composed of grid users, developers and researchers working in the field of grid computing. Advanced-level students focused on computer science and engineering will also find this book valuable as a reference or secondary text book.

Science Gateways for Distributed Computing Infrastructures

Science Gateways for Distributed Computing Infrastructures PDF Author: Péter Kacsuk
Publisher: Springer
ISBN: 3319112686
Category : Computers
Languages : en
Pages : 301

Book Description
The book describes the science gateway building technology developed in the SCI-BUS European project and its adoption and customization method, by which user communities, such as biologists, chemists, and astrophysicists, can build customized, domain-specific science gateways. Many aspects of the core technology are explained in detail, including its workflow capability, job submission mechanism to various grids and clouds, and its data transfer mechanisms among several distributed infrastructures. The book will be useful for scientific researchers and IT professionals engaged in the development of science gateways.

Parallel Processing and Applied Mathematics

Parallel Processing and Applied Mathematics PDF Author: Roman Wyrzykowski
Publisher: Springer
ISBN: 3319321498
Category : Computers
Languages : en
Pages : 622

Book Description
This two-volume set LNCS 9573 and LNCS 9574 constitutes the refereed proceedings of the 11th International Conference of Parallel Processing and Applied Mathematics, PPAM 2015, held in Krakow, Poland, in September 2015.The 111 revised full papers presented in both volumes were carefully reviewed and selected from 196 submissions. The focus of PPAM 2015 was on models, algorithms, and software tools which facilitate efficient and convenient utilization of modern parallel and distributed computing architectures, as well as on large-scale applications, including big data problems.

Cloud Computing with e-Science Applications

Cloud Computing with e-Science Applications PDF Author: Olivier Terzo
Publisher: CRC Press
ISBN: 1351831542
Category : Computers
Languages : en
Pages : 345

Book Description
The amount of data in everyday life has been exploding. This data increase has been especially significant in scientific fields, where substantial amounts of data must be captured, communicated, aggregated, stored, and analyzed. Cloud Computing with e-Science Applications explains how cloud computing can improve data management in data-heavy fields such as bioinformatics, earth science, and computer science. The book begins with an overview of cloud models supplied by the National Institute of Standards and Technology (NIST), and then: Discusses the challenges imposed by big data on scientific data infrastructures, including security and trust issues Covers vulnerabilities such as data theft or loss, privacy concerns, infected applications, threats in virtualization, and cross-virtual machine attack Describes the implementation of workflows in clouds, proposing an architecture composed of two layers—platform and application Details infrastructure-as-a-service (IaaS), platform-as-a-service (PaaS), and software-as-a-service (SaaS) solutions based on public, private, and hybrid cloud computing models Demonstrates how cloud computing aids in resource control, vertical and horizontal scalability, interoperability, and adaptive scheduling Featuring significant contributions from research centers, universities, and industries worldwide, Cloud Computing with e-Science Applications presents innovative cloud migration methodologies applicable to a variety of fields where large data sets are produced. The book provides the scientific community with an essential reference for moving applications to the cloud.

Building a National Distributed e-Infrastructure -- PL-Grid

Building a National Distributed e-Infrastructure -- PL-Grid PDF Author: Marian Bubak
Publisher: Springer
ISBN: 3642282679
Category : Computers
Languages : en
Pages : 354

Book Description
The goal of the project is to provide the polish scientific community with an IT platform based on grid computer clusters, enabling e-science research in various fields. The created infrastructure is both compatible and interoperable with existing european and worldwide grid frameworks. The system ensures scalability and enables the integration of additional local clusters, belonging to universities, research institutions and technology platforms. This state-of-the-art survey describes the experience and the scientific results obtained by project partners as well as the outcome of research and development activities carried out within the Polish Infrastructure for Information Science Support in the European Research Space PL-Grid (PL-Grid 2011), held in December 2011 in Krakow, Poland. The 26 papers are organized in topical sections on: eclipse parallel tools platform integrated with QosCosGrid, the migrating desktop, science gateways based on the vine toolkit, the gridspace experiment platform, and the InSilico-Lab environment.

Automated Optimization Methods for Scientific Workflows in e-Science Infrastructures

Automated Optimization Methods for Scientific Workflows in e-Science Infrastructures PDF Author: Sonja Holl
Publisher: Forschungszentrum Jülich
ISBN: 389336949X
Category :
Languages : en
Pages : 207

Book Description
Scientific workflows have emerged as a key technology that assists scientists with the design, management, execution, sharing and reuse of in silico experiments. Workflow management systems simplify the management of scientific workflows by providing graphical interfaces for their development, monitoring and analysis. Nowadays, e-Science combines such workflow management systems with large-scale data and computing resources into complex research infrastructures. For instance, e-Science allows the conveyance of best practice research in collaborations by providing workflow repositories, which facilitate the sharing and reuse of scientific workflows. However, scientists are still faced with different limitations while reusing workflows. One of the most common challenges they meet is the need to select appropriate applications and their individual execution parameters. If scientists do not want to rely on default or experience-based parameters, the best-effort option is to test different workflow set-ups using either trial and error approaches or parameter sweeps. Both methods may be inefficient or time consuming respectively, especially when tuning a large number of parameters. Therefore, scientists require an effective and efficient mechanism that automatically tests different workflow set-ups in an intelligent way and will help them to improve their scientific results. This thesis addresses the limitation described above by defining and implementing an approach for the optimization of scientific workflows. In the course of this work, scientists’ needs are investigated and requirements are formulated resulting in an appropriate optimization concept. In a following step, this concept is prototypically implemented by extending a workflow management system with an optimization framework, including general mechanisms required to conduct workflow optimization. As optimization is an ongoing research topic, different algorithms are provided by pluggable extensions (plugins) that can be loosely coupled with the framework, resulting in a generic and quickly extendable system. In this thesis, an exemplary plugin is introduced which applies a Genetic Algorithm for parameter optimization. In order to accelerate and therefore make workflow optimization feasible at all, e-Science infrastructures are utilized for the parallel execution of scientific workflows. This is empowered by additional extensions enabling the execution of applications and workflows on distributed computing resources. The actual implementation and therewith the general approach of workflow optimization is experimentally verified by four use cases in the life science domain. All workflows were significantly improved, which demonstrates the advantage of the proposed workflow optimization. Finally, a new collaboration-based approach is introduced that harnesses optimization provenance to make optimization faster and more robust in the future.

Remote Instrumentation for eScience and Related Aspects

Remote Instrumentation for eScience and Related Aspects PDF Author: Franco Davoli
Publisher: Springer Science & Business Media
ISBN: 1461405076
Category : Technology & Engineering
Languages : en
Pages : 306

Book Description
This book will focus on new Remote Instrumentation aspects related to middleware architecture, high-speed networking, wireless Grid for acquisition devices and sensor networks, QoS provisioning for real-time control, measurement instrumentation and methodology. Moreover, it will provide knowledge about the automation of mechanisms oriented to accompanying processes that are usually performed by a human. Another important point of this book is focusing on the future trends concerning Remote Instrumentation systems development and actions related to standardization of remote instrumentation mechanisms.

Guide to e-Science

Guide to e-Science PDF Author: Xiaoyu Yang
Publisher: Springer Science & Business Media
ISBN: 0857294393
Category : Computers
Languages : en
Pages : 554

Book Description
This guidebook on e-science presents real-world examples of practices and applications, demonstrating how a range of computational technologies and tools can be employed to build essential infrastructures supporting next-generation scientific research. Each chapter provides introductory material on core concepts and principles, as well as descriptions and discussions of relevant e-science methodologies, architectures, tools, systems, services and frameworks. Features: includes contributions from an international selection of preeminent e-science experts and practitioners; discusses use of mainstream grid computing and peer-to-peer grid technology for “open” research and resource sharing in scientific research; presents varied methods for data management in data-intensive research; investigates issues of e-infrastructure interoperability, security, trust and privacy for collaborative research; examines workflow technology for the automation of scientific processes; describes applications of e-science.

Network and Parallel Computing

Network and Parallel Computing PDF Author: James J. Park
Publisher: Springer Science & Business Media
ISBN: 3642356060
Category : Computers
Languages : en
Pages : 665

Book Description
This book constitutes the refereed post-proceedings of the 9th IFIP International Conference on Network and Parallel Computing, NPC 2012, held in Gwangju, Korea, in September 2012. The 38 papers presented were carefully reviewed and selected from 136 submissions. The papers are organized in the following topical sections: algorithms, scheduling, analysis, and data mining; network architecture and protocol design; network security; paralel, distributed, and virtualization techniques; performance modeling, prediction, and tuning; resource management; ubiquitous communications and networks; and web, communication, and cloud computing. In addition, a total of 37 papers selected from five satellite workshops (ATIMCN, ATSME, Cloud&Grid, DATICS, and UMAS 2012) are included.