Randomization, Bootstrap and Monte Carlo Methods in Biology PDF Download

Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 1482296411
Category : Mathematics
Languages : en
Pages : 468

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Book Description
Modern computer-intensive statistical methods play a key role in solving many problems across a wide range of scientific disciplines. This new edition of the bestselling Randomization, Bootstrap and Monte Carlo Methods in Biology illustrates the value of a number of these methods with an emphasis on biological applications. This textbook focuses on three related areas in computational statistics: randomization, bootstrapping, and Monte Carlo methods of inference. The author emphasizes the sampling approach within randomization testing and confidence intervals. Similar to randomization, the book shows how bootstrapping, or resampling, can be used for confidence intervals and tests of significance. It also explores how to use Monte Carlo methods to test hypotheses and construct confidence intervals. New to the Third Edition Updated information on regression and time series analysis, multivariate methods, survival and growth data as well as software for computational statistics References that reflect recent developments in methodology and computing techniques Additional references on new applications of computer-intensive methods in biology Providing comprehensive coverage of computer-intensive applications while also offering data sets online, Randomization, Bootstrap and Monte Carlo Methods in Biology, Third Edition supplies a solid foundation for the ever-expanding field of statistics and quantitative analysis in biology.

Author: Bryan F.J. Manly
Publisher: Chapman and Hall/CRC
ISBN:
Category : Mathematics
Languages : en
Pages : 304

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Book Description
Randomizatioon tests and confidence intervals; Monte Carlo and other computer intensive methods; Some general considerations; One and two sample tests; Regression analysis; Distance matrices and spatial data; Other analyses on sptatial data; Time series; Multivariate data.

Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 9780412721304
Category : Mathematics
Languages : en
Pages : 428

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Book Description
Randomization, Bootstrap and Monte Carlo Methods in Biology, Second Edition features new material on on bootstrap confidence intervals and significance testing, and incorporates new developments on the treatments of randomization methods for regression and analysis variation, including descriptions of applications of these methods in spreadsheet programs such as Lotus and other commercial packages. This second edition illustrates the value of modern computer intensive methods in the solution of a wide range of problems, with particular emphasis on biological applications. Examples given in the text include the controversial topic of whether there is periodicity between co-occurrences of species on islands.

Author: Bryan F.J. Manly
Publisher: CRC Press
ISBN: 9781584884149
Category : Mathematics
Languages : en
Pages : 228

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Book Description
Multivariate methods are now widely used in the quantitative sciences as well as in statistics because of the ready availability of computer packages for performing the calculations. While access to suitable computer software is essential to using multivariate methods, using the software still requires a working knowledge of these methods and how they can be used. Multivariate Statistical Methods: A Primer, Third Edition introduces these methods and provides a general overview of the techniques without overwhelming you with comprehensive details. This thoroughly revised, updated edition of a best-selling introductory text retains the author's trademark clear, concise style but includes a range of new material, new exercises, and supporting materials on the Web. New in the Third Edition: Fully updated references Additional examples and exercises from the social and environmental sciences A comparison of the various statistical software packages, including Stata, Statistica, SAS Minitab, and Genstat, particularly in terms of their ease of use by beginners In his efforts to produce a book that is as short as possible and that enables you to begin to use multivariate methods in an intelligent manner, the author has produced a succinct and handy reference. With updated information on multivariate analyses, new examples using the latest software, and updated references, this book provides a timely introduction to useful tools for statistical analysis.

Author: Andrew Gelman
Publisher: CRC Press
ISBN: 1439840954
Category : Mathematics
Languages : en
Pages : 677

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Book Description
Now in its third edition, this classic book is widely considered the leading text on Bayesian methods, lauded for its accessible, practical approach to analyzing data and solving research problems. Bayesian Data Analysis, Third Edition continues to take an applied approach to analysis using up-to-date Bayesian methods. The authors—all leaders in the statistics community—introduce basic concepts from a data-analytic perspective before presenting advanced methods. Throughout the text, numerous worked examples drawn from real applications and research emphasize the use of Bayesian inference in practice. New to the Third Edition Four new chapters on nonparametric modeling Coverage of weakly informative priors and boundary-avoiding priors Updated discussion of cross-validation and predictive information criteria Improved convergence monitoring and effective sample size calculations for iterative simulation Presentations of Hamiltonian Monte Carlo, variational Bayes, and expectation propagation New and revised software code The book can be used in three different ways. For undergraduate students, it introduces Bayesian inference starting from first principles. For graduate students, the text presents effective current approaches to Bayesian modeling and computation in statistics and related fields. For researchers, it provides an assortment of Bayesian methods in applied statistics. Additional materials, including data sets used in the examples, solutions to selected exercises, and software instructions, are available on the book’s web page.

Author: Vidyadhar G. Kulkarni
Publisher: CRC Press
ISBN: 1498756727
Category : Business & Economics
Languages : en
Pages : 373

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Book Description
Building on the author’s more than 35 years of teaching experience, Modeling and Analysis of Stochastic Systems, Third Edition, covers the most important classes of stochastic processes used in the modeling of diverse systems. For each class of stochastic process, the text includes its definition, characterization, applications, transient and limiting behavior, first passage times, and cost/reward models. The third edition has been updated with several new applications, including the Google search algorithm in discrete time Markov chains, several examples from health care and finance in continuous time Markov chains, and square root staffing rule in Queuing models. More than 50 new exercises have been added to enhance its use as a course text or for self-study. The sequence of chapters and exercises has been maintained between editions, to enable those now teaching from the second edition to use the third edition. Rather than offer special tricks that work in specific problems, this book provides thorough coverage of general tools that enable the solution and analysis of stochastic models. After mastering the material in the text, readers will be well-equipped to build and analyze useful stochastic models for real-life situations.

Author: Kenneth J. Berry
Publisher: Springer Science & Business Media
ISBN: 3319027441
Category : Mathematics
Languages : en
Pages : 517

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Book Description
The focus of this book is on the birth and historical development of permutation statistical methods from the early 1920s to the near present. Beginning with the seminal contributions of R.A. Fisher, E.J.G. Pitman, and others in the 1920s and 1930s, permutation statistical methods were initially introduced to validate the assumptions of classical statistical methods. Permutation methods have advantages over classical methods in that they are optimal for small data sets and non-random samples, are data-dependent, and are free of distributional assumptions. Permutation probability values may be exact, or estimated via moment- or resampling-approximation procedures. Because permutation methods are inherently computationally-intensive, the evolution of computers and computing technology that made modern permutation methods possible accompanies the historical narrative. Permutation analogs of many well-known statistical tests are presented in a historical context, including multiple correlation and regression, analysis of variance, contingency table analysis, and measures of association and agreement. A non-mathematical approach makes the text accessible to readers of all levels.

Author: Cavan Reilly
Publisher: CRC Press
ISBN: 1420072641
Category : Mathematics
Languages : en
Pages : 284

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Book Description
Focusing on the roles of different segments of DNA, Statistics in Human Genetics and Molecular Biology provides a basic understanding of problems arising in the analysis of genetics and genomics. It presents statistical applications in genetic mapping, DNA/protein sequence alignment, and analyses of gene expression data from microarray experiments.

Author: Mark Woodward
Publisher: CRC Press
ISBN: 1482243202
Category : Mathematics
Languages : en
Pages : 844

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Book Description
Highly praised for its broad, practical coverage, the second edition of this popular text incorporated the major statistical models and issues relevant to epidemiological studies. Epidemiology: Study Design and Data Analysis, Third Edition continues to focus on the quantitative aspects of epidemiological research. Updated and expanded, this edition shows students how statistical principles and techniques can help solve epidemiological problems. New to the Third Edition New chapter on risk scores and clinical decision rules New chapter on computer-intensive methods, including the bootstrap, permutation tests, and missing value imputation New sections on binomial regression models, competing risk, information criteria, propensity scoring, and splines Many more exercises and examples using both Stata and SAS More than 60 new figures After introducing study design and reviewing all the standard methods, this self-contained book takes students through analytical methods for both general and specific epidemiological study designs, including cohort, case-control, and intervention studies. In addition to classical methods, it now covers modern methods that exploit the enormous power of contemporary computers. The book also addresses the problem of determining the appropriate size for a study, discusses statistical modeling in epidemiology, covers methods for comparing and summarizing the evidence from several studies, and explains how to use statistical models in risk forecasting and assessing new biomarkers. The author illustrates the techniques with numerous real-world examples and interprets results in a practical way. He also includes an extensive list of references for further reading along with exercises to reinforce understanding. Web Resource A wealth of supporting material can be downloaded from the book’s CRC Press web page, including: Real-life data sets used in the text SAS and Stata programs used for examples in the text SAS and Stata programs for special techniques covered Sample size spreadsheet

Author: Athanasios Christou Micheas
Publisher: CRC Press
ISBN: 146651521X
Category : Mathematics
Languages : en
Pages : 409

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Book Description
This book defines and investigates the concept of a random object. To accomplish this task in a natural way, it brings together three major areas; statistical inference, measure-theoretic probability theory and stochastic processes. This point of view has not been explored by existing textbooks; one would need material on real analysis, measure and probability theory, as well as stochastic processes - in addition to at least one text on statistics- to capture the detail and depth of material that has gone into this volume. Presents and illustrates ‘random objects’ in different contexts, under a unified framework, starting with rudimentary results on random variables and random sequences, all the way up to stochastic partial differential equations. Reviews rudimentary probability and introduces statistical inference, from basic to advanced, thus making the transition from basic statistical modeling and estimation to advanced topics more natural and concrete. Compact and comprehensive presentation of the material that will be useful to a reader from the mathematics and statistical sciences, at any stage of their career, either as a graduate student, an instructor, or an academician conducting research and requiring quick references and examples to classic topics. Includes 378 exercises, with the solutions manual available on the book's website. 121 illustrative examples of the concepts presented in the text (many including multiple items in a single example). The book is targeted towards students at the master’s and Ph.D. levels, as well as, academicians in the mathematics, statistics and related disciplines. Basic knowledge of calculus and matrix algebra is required. Prior knowledge of probability or measure theory is welcomed but not necessary.